Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 AP003733.1-201ENST00000491725 852 ntBASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 AC087388.1-201ENST00000571370 1112 ntBASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 LINC00167-201ENST00000530583 1419 ntBASIC20.83■□□□□ 0.93
PCDHA4Q9UN74 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHA4Q9UN74 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 IGHGP-201ENST00000390555 1178 ntBASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 AL645929.1-201ENST00000420084 975 ntBASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 AL445228.2-201ENST00000605589 952 ntBASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHA4Q9UN74 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 AC132938.6-201ENST00000623828 1655 ntBASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 FAM86EP-206ENST00000510506 987 ntBASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 RNF126P1-202ENST00000569893 925 ntBASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHA4Q9UN74 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 AC005332.3-201ENST00000589904 676 ntBASIC20.8■□□□□ 0.92
PCDHA4Q9UN74 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms