Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RN7SL606P-201ENST00000472779 293 ntBASIC16.73■□□□□ 0.27
LRFN1Q9P244 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 AC074051.2-201ENST00000565115 352 ntBASIC16.73■□□□□ 0.27
LRFN1Q9P244 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 AL121772.3-201ENST00000610840 674 ntBASIC16.73■□□□□ 0.27
LRFN1Q9P244 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 AC233702.3-201ENST00000578656 1387 ntBASIC16.73■□□□□ 0.27
LRFN1Q9P244 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LRFN1Q9P244 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN1Q9P244 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 LINC00167-201ENST00000530583 1419 ntBASIC16.72■□□□□ 0.27
LRFN1Q9P244 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.72■□□□□ 0.27
LRFN1Q9P244 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRFN1Q9P244 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN1Q9P244 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 ANO7L1-203ENST00000602586 1720 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 AC113404.2-201ENST00000507884 177 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 FOSL1P1-201ENST00000511041 816 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 AC011840.4-201ENST00000578471 627 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 RN7SL510P-201ENST00000581311 263 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 AL020996.1-203ENST00000536896 2307 ntBASIC16.71■□□□□ 0.27
LRFN1Q9P244 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRFN1Q9P244 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRFN1Q9P244 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRFN1Q9P244 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms