Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 LINC01023-201ENST00000606054 436 ntBASIC18.61■□□□□ 0.57
UBP1Q9NZI7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.61■□□□□ 0.57
UBP1Q9NZI7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 PHGDH-209ENST00000641074 1780 ntBASIC18.6■□□□□ 0.57
UBP1Q9NZI7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 LINC01126-201ENST00000623515 1646 ntBASIC18.6■□□□□ 0.57
UBP1Q9NZI7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 AL157888.1-201ENST00000631930 593 ntBASIC18.6■□□□□ 0.57
UBP1Q9NZI7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBP1Q9NZI7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.59■□□□□ 0.57
UBP1Q9NZI7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC140113.3-201ENST00000605663 199 ntBASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 AL096828.2-201ENST00000567259 1965 ntBASIC18.59■□□□□ 0.57
UBP1Q9NZI7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBP1Q9NZI7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.58■□□□□ 0.57
UBP1Q9NZI7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 AC073508.3-201ENST00000619697 1419 ntBASIC18.58■□□□□ 0.57
UBP1Q9NZI7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms