Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC52A1Q9NWF4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 AC007967.3-201ENST00000434308 558 ntBASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 AC079781.4-201ENST00000641908 219 ntBASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 PMPCAP1-201ENST00000508114 1576 ntBASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 AL499627.1-201ENST00000569373 2188 ntBASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC52A1Q9NWF4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.76
SLC52A1Q9NWF4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AC002347.1-201ENST00000569543 541 ntBASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AL355385.1-201ENST00000606123 409 ntBASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 AL022326.1-202ENST00000641533 845 ntBASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SLC52A1Q9NWF4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 COA5-202ENST00000409997 557 ntTSL 4 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 PRYP5-201ENST00000451909 266 ntBASIC26■■□□□ 1.75
SLC52A1Q9NWF4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC26■■□□□ 1.75
SLC52A1Q9NWF4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 AC134684.3-201ENST00000641758 218 ntBASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC25.99■■□□□ 1.75
SLC52A1Q9NWF4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 PGM5P2-202ENST00000637225 1043 ntBASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SLC52A1Q9NWF4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLC52A1Q9NWF4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms