Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 AL136038.3-201ENST00000561909 1096 ntBASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 AL121956.5-201ENST00000625261 221 ntBASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 LINC00167-201ENST00000530583 1419 ntBASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ECHDC1Q9NTX5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.2■■□□□ 1.15
ECHDC1Q9NTX5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
ECHDC1Q9NTX5 AC132938.6-201ENST00000623828 1655 ntBASIC22.2■■□□□ 1.15
ECHDC1Q9NTX5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 AP003733.1-201ENST00000491725 852 ntBASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 KRT18P35-201ENST00000510488 1269 ntBASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ECHDC1Q9NTX5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 IGHGP-201ENST00000390555 1178 ntBASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 AC087388.1-201ENST00000571370 1112 ntBASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ECHDC1Q9NTX5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 AL645929.1-201ENST00000420084 975 ntBASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 FAM86EP-206ENST00000510506 987 ntBASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 RNF126P1-202ENST00000569893 925 ntBASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 AL445228.2-201ENST00000605589 952 ntBASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ECHDC1Q9NTX5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms