Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 SDHAP1-207ENST00000440850 2000 ntBASIC16.61■□□□□ 0.25
HMG20AQ9NP66 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMG20AQ9NP66 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 LINC01126-201ENST00000623515 1646 ntBASIC16.6■□□□□ 0.25
HMG20AQ9NP66 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 AC097658.1-201ENST00000475555 843 ntBASIC16.6■□□□□ 0.25
HMG20AQ9NP66 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 UBALD1-205ENST00000590891 2641 ntBASIC16.6■□□□□ 0.25
HMG20AQ9NP66 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 TFP1-202ENST00000475455 1573 ntBASIC16.6■□□□□ 0.25
HMG20AQ9NP66 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.6■□□□□ 0.25
HMG20AQ9NP66 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AC093677.2-201ENST00000600169 1863 ntBASIC16.59■□□□□ 0.25
HMG20AQ9NP66 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMG20AQ9NP66 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMG20AQ9NP66 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms