Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 AC084018.2-201ENST00000613093 2607 ntBASIC19.17■□□□□ 0.66
CD248Q9HCU0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD248Q9HCU0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD248Q9HCU0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 ZNF444P1-201ENST00000559497 298 ntBASIC19.16■□□□□ 0.66
CD248Q9HCU0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD248Q9HCU0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.16■□□□□ 0.66
CD248Q9HCU0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 TSPY21P-201ENST00000433481 731 ntBASIC19.15■□□□□ 0.66
CD248Q9HCU0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.15■□□□□ 0.66
CD248Q9HCU0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD248Q9HCU0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.14■□□□□ 0.66
CD248Q9HCU0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.14■□□□□ 0.66
CD248Q9HCU0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.14■□□□□ 0.66
CD248Q9HCU0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD248Q9HCU0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms