Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 AD000864.1-201ENST00000624076 2295 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 AC080080.1-201ENST00000625121 2420 ntBASIC12.25□□□□□ -0.45
SND1-IT1Q9HBX3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 FLJ13224-201ENST00000313737 1514 ntBASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 CDCA4P2-201ENST00000441182 718 ntBASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC097658.1-201ENST00000475555 843 ntBASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC112777.1-201ENST00000540175 1423 ntBASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 AC141586.5-201ENST00000624546 2050 ntBASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SND1-IT1Q9HBX3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 MTMR9LP-203ENST00000426597 1545 ntBASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AL121832.2-201ENST00000610979 668 ntBASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 MIR5787-201ENST00000611784 55 ntBASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms