Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR1BQ9H9Y6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 AC090164.3-201ENST00000610780 2143 ntBASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 KRT17P6-201ENST00000453795 1220 ntBASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
POLR1BQ9H9Y6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MIR3180-1-201ENST00000580374 94 ntBASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MIR3180-3-201ENST00000584616 94 ntBASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLR1BQ9H9Y6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms