Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PIF1Q9H611 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PIF1Q9H611 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PIF1Q9H611 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.46■□□□□ 0.39
PIF1Q9H611 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 RPS2P4-201ENST00000476944 856 ntBASIC17.46■□□□□ 0.39
PIF1Q9H611 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PIF1Q9H611 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 PCDHA12-202ENST00000613593 2588 ntBASIC17.46■□□□□ 0.39
PIF1Q9H611 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.46■□□□□ 0.39
PIF1Q9H611 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PIF1Q9H611 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PIF1Q9H611 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PIF1Q9H611 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.45■□□□□ 0.38
PIF1Q9H611 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.45■□□□□ 0.38
PIF1Q9H611 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.45■□□□□ 0.38
PIF1Q9H611 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
PIF1Q9H611 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PIF1Q9H611 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.45■□□□□ 0.38
PIF1Q9H611 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.45■□□□□ 0.38
PIF1Q9H611 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.45■□□□□ 0.38
PIF1Q9H611 AC110285.5-201ENST00000611501 352 ntBASIC17.45■□□□□ 0.38
PIF1Q9H611 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.45■□□□□ 0.38
PIF1Q9H611 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.45■□□□□ 0.38
PIF1Q9H611 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 HTR7P1-201ENST00000538670 1336 ntBASIC17.45■□□□□ 0.38
PIF1Q9H611 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PIF1Q9H611 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
PIF1Q9H611 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
PIF1Q9H611 AL096828.2-201ENST00000567259 1965 ntBASIC17.44■□□□□ 0.38
PIF1Q9H611 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PIF1Q9H611 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PIF1Q9H611 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 ABHD17AP1-201ENST00000358206 933 ntBASIC17.44■□□□□ 0.38
PIF1Q9H611 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.44■□□□□ 0.38
PIF1Q9H611 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
PIF1Q9H611 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
PIF1Q9H611 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PIF1Q9H611 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PIF1Q9H611 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PIF1Q9H611 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PIF1Q9H611 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PIF1Q9H611 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PIF1Q9H611 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.43■□□□□ 0.38
PIF1Q9H611 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.43■□□□□ 0.38
PIF1Q9H611 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PIF1Q9H611 AC124016.1-201ENST00000609552 612 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms