Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
DDX47Q9H0S4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 MIR6786-201ENST00000616843 113 ntBASIC19.03■□□□□ 0.64
DDX47Q9H0S4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX47Q9H0S4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 AL353807.1-201ENST00000427475 662 ntBASIC19.02■□□□□ 0.64
DDX47Q9H0S4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 AC073648.6-201ENST00000641589 218 ntBASIC19.02■□□□□ 0.64
DDX47Q9H0S4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
DDX47Q9H0S4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DDX47Q9H0S4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DDX47Q9H0S4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.02■□□□□ 0.63
DDX47Q9H0S4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX47Q9H0S4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DDX47Q9H0S4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
DDX47Q9H0S4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19■□□□□ 0.63
DDX47Q9H0S4 MESTP1-201ENST00000404287 994 ntBASIC19■□□□□ 0.63
DDX47Q9H0S4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19■□□□□ 0.63
DDX47Q9H0S4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms