Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC023511.2-201ENST00000618803 211 ntBASIC21.63■■□□□ 1.05
NBPF3Q9H094 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.63■■□□□ 1.05
NBPF3Q9H094 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.63■■□□□ 1.05
NBPF3Q9H094 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF3Q9H094 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF3Q9H094 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NBPF3Q9H094 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NBPF3Q9H094 BICD1-207ENST00000551848 1962 ntBASIC21.63■■□□□ 1.05
NBPF3Q9H094 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF3Q9H094 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF3Q9H094 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
NBPF3Q9H094 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF3Q9H094 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 LINC00167-201ENST00000530583 1419 ntBASIC21.61■■□□□ 1.05
NBPF3Q9H094 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NBPF3Q9H094 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NBPF3Q9H094 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 AC132938.6-201ENST00000623828 1655 ntBASIC21.6■■□□□ 1.05
NBPF3Q9H094 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 KRT89P-201ENST00000620027 1478 ntBASIC21.6■■□□□ 1.05
NBPF3Q9H094 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 IGHGP-201ENST00000390555 1178 ntBASIC21.6■■□□□ 1.05
NBPF3Q9H094 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 AL390719.2-201ENST00000606993 987 ntBASIC21.6■■□□□ 1.05
NBPF3Q9H094 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NBPF3Q9H094 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NBPF3Q9H094 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.59■■□□□ 1.05
NBPF3Q9H094 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NBPF3Q9H094 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF3Q9H094 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms