Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 LETM1P2-201ENST00000597330 2178 ntBASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2OQ9C0C9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 AC011467.4-201ENST00000594891 528 ntBASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.06■□□□□ 0.8
UBE2OQ9C0C9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 AL645939.2-201ENST00000427340 991 ntBASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2OQ9C0C9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 AC125437.2-201ENST00000625180 2167 ntBASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 COX20P2-201ENST00000452636 358 ntBASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 UNC93B6-202ENST00000528242 690 ntBASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms