Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM2Q9C040 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM2Q9C040 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 CYP2D8P-201ENST00000433633 1490 ntBASIC16.8■□□□□ 0.28
TRIM2Q9C040 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 LINC01568-207ENST00000641790 1380 ntBASIC16.8■□□□□ 0.28
TRIM2Q9C040 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 AC128688.1-201ENST00000487626 519 ntBASIC16.8■□□□□ 0.28
TRIM2Q9C040 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 MIR3180-4-201ENST00000582223 153 ntBASIC16.8■□□□□ 0.28
TRIM2Q9C040 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 AC112497.1-201ENST00000624824 639 ntBASIC16.8■□□□□ 0.28
TRIM2Q9C040 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM2Q9C040 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM2Q9C040 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 SDHAP2-201ENST00000455183 2001 ntBASIC16.79■□□□□ 0.28
TRIM2Q9C040 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC010947.1-201ENST00000623454 693 ntBASIC16.79■□□□□ 0.28
TRIM2Q9C040 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms