Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFAF3Q9BU61 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 AC006557.6-201ENST00000623071 864 ntBASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFAF3Q9BU61 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 DOC2GP-204ENST00000639052 2548 ntBASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PRKY-204ENST00000533551 1019 ntBASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 AC120498.8-201ENST00000614275 531 ntBASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms