Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.63■□□□□ 0.25
NPAS1Q99742 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS1Q99742 VENTXP5-201ENST00000523979 775 ntBASIC16.63■□□□□ 0.25
NPAS1Q99742 AL445228.2-201ENST00000605589 952 ntBASIC16.63■□□□□ 0.25
NPAS1Q99742 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS1Q99742 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
NPAS1Q99742 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS1Q99742 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS1Q99742 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS1Q99742 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 AC135776.1-201ENST00000319817 2481 ntBASIC16.62■□□□□ 0.25
NPAS1Q99742 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS1Q99742 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NPAS1Q99742 HBZP1-201ENST00000354915 429 ntBASIC16.62■□□□□ 0.25
NPAS1Q99742 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.62■□□□□ 0.25
NPAS1Q99742 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 AC034232.1-201ENST00000506026 1064 ntBASIC16.62■□□□□ 0.25
NPAS1Q99742 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS1Q99742 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS1Q99742 MIR3180-4-201ENST00000582223 153 ntBASIC16.62■□□□□ 0.25
NPAS1Q99742 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS1Q99742 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS1Q99742 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS1Q99742 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NPAS1Q99742 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 AL024508.2-201ENST00000607749 1894 ntBASIC16.61■□□□□ 0.25
NPAS1Q99742 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 AL031133.1-201ENST00000406807 723 ntBASIC16.61■□□□□ 0.25
NPAS1Q99742 AL671277.2-201ENST00000458060 996 ntBASIC16.61■□□□□ 0.25
NPAS1Q99742 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS1Q99742 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS1Q99742 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.61■□□□□ 0.25
NPAS1Q99742 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS1Q99742 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 LINC01311-201ENST00000565162 1445 ntBASIC16.61■□□□□ 0.25
NPAS1Q99742 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NPAS1Q99742 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS1Q99742 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPAS1Q99742 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS1Q99742 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 HLA-F-220ENST00000434407 884 ntBASIC16.6■□□□□ 0.25
NPAS1Q99742 PVRIG2P-201ENST00000435460 978 ntBASIC16.6■□□□□ 0.25
NPAS1Q99742 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms