Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDK5RAP1Q96SZ6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 CLEC4GP1-201ENST00000596555 870 ntBASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 AC099343.3-201ENST00000605834 2503 ntBASIC18.89■□□□□ 0.61
CDK5RAP1Q96SZ6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 AC005082.1-201ENST00000413042 2259 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 NUS1P1-201ENST00000446295 882 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 AP000867.3-201ENST00000524675 377 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 PRELID1P1-202ENST00000567272 903 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 AL138781.2-201ENST00000617896 1843 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 ESPNP-201ENST00000270691 2015 ntBASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK5RAP1Q96SZ6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AC104819.1-201ENST00000504587 486 ntBASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AC098818.2-201ENST00000564925 2320 ntBASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AC233702.3-201ENST00000578656 1387 ntBASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 AL353801.3-201ENST00000609898 542 ntBASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK5RAP1Q96SZ6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms