Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 AC093010.1-201ENST00000473625 1624 ntBASIC21.61■■□□□ 1.05
NEK1Q96PY6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEK1Q96PY6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.61■■□□□ 1.05
NEK1Q96PY6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 RASA4DP-201ENST00000460726 1199 ntBASIC21.6■■□□□ 1.05
NEK1Q96PY6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.6■■□□□ 1.05
NEK1Q96PY6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEK1Q96PY6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.59■■□□□ 1.05
NEK1Q96PY6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.59■■□□□ 1.05
NEK1Q96PY6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NEK1Q96PY6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NEK1Q96PY6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 FLJ13224-201ENST00000313737 1514 ntBASIC21.59■■□□□ 1.05
NEK1Q96PY6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.59■■□□□ 1.05
NEK1Q96PY6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEK1Q96PY6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.58■■□□□ 1.05
NEK1Q96PY6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.58■■□□□ 1.05
NEK1Q96PY6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NEK1Q96PY6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.58■■□□□ 1.04
NEK1Q96PY6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.58■■□□□ 1.04
NEK1Q96PY6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
NEK1Q96PY6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEK1Q96PY6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEK1Q96PY6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.57■■□□□ 1.04
NEK1Q96PY6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms