Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3BQ96NU0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 HEIH-201ENST00000623091 1652 ntBASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 AC025062.2-201ENST00000605477 670 ntBASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 AL078644.1-201ENST00000609881 752 ntBASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 ELL2P1-201ENST00000413990 1906 ntBASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3BQ96NU0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CNTNAP3BQ96NU0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AC010240.3-201ENST00000607688 395 ntBASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AC002310.6-201ENST00000624451 1377 ntBASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 AP005212.1-201ENST00000581547 1997 ntBASIC17.39■□□□□ 0.37
CNTNAP3BQ96NU0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 AL513190.1-201ENST00000621254 727 ntBASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3BQ96NU0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms