Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRCH3Q96II8 AC097374.2-201ENST00000618617 1306 ntBASIC19.7■□□□□ 0.74
LRCH3Q96II8 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
LRCH3Q96II8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRCH3Q96II8 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.69■□□□□ 0.74
LRCH3Q96II8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRCH3Q96II8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AC005225.4-201ENST00000557330 545 ntBASIC19.68■□□□□ 0.74
LRCH3Q96II8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRCH3Q96II8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
LRCH3Q96II8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 RCC2P3-201ENST00000418112 1537 ntBASIC19.67■□□□□ 0.74
LRCH3Q96II8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 NKAPP1-205ENST00000585790 367 ntBASIC19.67■□□□□ 0.74
LRCH3Q96II8 Z92544.3-201ENST00000624747 417 ntBASIC19.67■□□□□ 0.74
LRCH3Q96II8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRCH3Q96II8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.67■□□□□ 0.74
LRCH3Q96II8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH3Q96II8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 HEIH-201ENST00000623091 1652 ntBASIC19.66■□□□□ 0.74
LRCH3Q96II8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC004449.1-201ENST00000564240 433 ntBASIC19.66■□□□□ 0.74
LRCH3Q96II8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 MIR3180-4-201ENST00000582223 153 ntBASIC19.66■□□□□ 0.74
LRCH3Q96II8 AL139288.1-201ENST00000623748 933 ntBASIC19.66■□□□□ 0.74
LRCH3Q96II8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRCH3Q96II8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH3Q96II8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms