Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC34Q96HJ3 AC068880.1-201ENST00000507289 2297 ntBASIC20.73■□□□□ 0.91
CCDC34Q96HJ3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC34Q96HJ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 REXO1L12P-201ENST00000622156 912 ntBASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 AC113410.3-201ENST00000623366 203 ntBASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 AC106820.2-201ENST00000563775 3264 ntBASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC34Q96HJ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 GCSHP5-201ENST00000443090 522 ntBASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 TSPY17P-201ENST00000450329 467 ntBASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 AC026471.5-201ENST00000615068 467 ntBASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 ESPNP-201ENST00000270691 2015 ntBASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC34Q96HJ3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC34Q96HJ3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC34Q96HJ3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 HOXB1-202ENST00000577092 1414 ntBASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 AC009102.3-201ENST00000623118 1491 ntBASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC34Q96HJ3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 AC008764.6-201ENST00000595909 2069 ntBASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 AC012313.1-201ENST00000593393 3059 ntBASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 MIR149-201ENST00000384879 89 ntBASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC34Q96HJ3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms