Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AL390719.2-201ENST00000606993 987 ntBASIC15.34■□□□□ 0.05
TIMD4Q96H15 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMD4Q96H15 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMD4Q96H15 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TIMD4Q96H15 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMD4Q96H15 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.33■□□□□ 0.05
TIMD4Q96H15 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMD4Q96H15 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMD4Q96H15 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.33■□□□□ 0.05
TIMD4Q96H15 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 AP002414.4-201ENST00000589764 1148 ntBASIC15.33■□□□□ 0.04
TIMD4Q96H15 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TIMD4Q96H15 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMD4Q96H15 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 PRELID1P1-202ENST00000567272 903 ntBASIC15.32■□□□□ 0.04
TIMD4Q96H15 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 NPAP1P7-201ENST00000613027 823 ntBASIC15.32■□□□□ 0.04
TIMD4Q96H15 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TIMD4Q96H15 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMD4Q96H15 ANO7L1-203ENST00000602586 1720 ntBASIC15.31■□□□□ 0.04
TIMD4Q96H15 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 AL353692.3-201ENST00000407031 1396 ntBASIC15.31■□□□□ 0.04
TIMD4Q96H15 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms