Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HDAC11Q96DB2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HDAC11Q96DB2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.79■□□□□ 0.6
HDAC11Q96DB2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 TERF1P1-201ENST00000311003 1181 ntBASIC18.79■□□□□ 0.6
HDAC11Q96DB2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 MIR3917-201ENST00000580971 93 ntBASIC18.79■□□□□ 0.6
HDAC11Q96DB2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HDAC11Q96DB2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC073508.3-201ENST00000619697 1419 ntBASIC18.78■□□□□ 0.6
HDAC11Q96DB2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC211429.1-201ENST00000415277 523 ntBASIC18.78■□□□□ 0.6
HDAC11Q96DB2 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.78■□□□□ 0.6
HDAC11Q96DB2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HDAC11Q96DB2 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.77■□□□□ 0.6
HDAC11Q96DB2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 AL137013.1-201ENST00000432946 1228 ntBASIC18.77■□□□□ 0.6
HDAC11Q96DB2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 LINC01023-201ENST00000606054 436 ntBASIC18.77■□□□□ 0.6
HDAC11Q96DB2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HDAC11Q96DB2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms