Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC58Q96CX6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 CR392000.1-201ENST00000624770 1228 ntBASIC17.37■□□□□ 0.37
LRRC58Q96CX6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC58Q96CX6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 AC011506.1-201ENST00000474329 610 ntBASIC17.36■□□□□ 0.37
LRRC58Q96CX6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 AL163051.1-201ENST00000569214 1512 ntBASIC17.36■□□□□ 0.37
LRRC58Q96CX6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 AC093010.1-201ENST00000473625 1624 ntBASIC17.36■□□□□ 0.37
LRRC58Q96CX6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC58Q96CX6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 AL353807.1-201ENST00000427475 662 ntBASIC17.35■□□□□ 0.37
LRRC58Q96CX6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 RN7SL471P-201ENST00000580476 299 ntBASIC17.35■□□□□ 0.37
LRRC58Q96CX6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 AC009102.3-201ENST00000623118 1491 ntBASIC17.35■□□□□ 0.37
LRRC58Q96CX6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms