Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4DQ92854 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA4DQ92854 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 HBZP1-201ENST00000354915 429 ntBASIC19.62■□□□□ 0.73
SEMA4DQ92854 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 FAM8A6P-201ENST00000407496 1135 ntBASIC19.62■□□□□ 0.73
SEMA4DQ92854 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 FAM210CP-201ENST00000445714 574 ntBASIC19.62■□□□□ 0.73
SEMA4DQ92854 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 AL133373.2-201ENST00000623187 2828 ntBASIC19.62■□□□□ 0.73
SEMA4DQ92854 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SEMA4DQ92854 AC132938.6-201ENST00000623828 1655 ntBASIC19.62■□□□□ 0.73
SEMA4DQ92854 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4DQ92854 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 SPDYE13P-201ENST00000445314 798 ntBASIC19.61■□□□□ 0.73
SEMA4DQ92854 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA4DQ92854 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA4DQ92854 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 AP000997.3-201ENST00000623333 2250 ntBASIC19.6■□□□□ 0.73
SEMA4DQ92854 AC138028.4-201ENST00000564984 1845 ntBASIC19.6■□□□□ 0.73
SEMA4DQ92854 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA4DQ92854 AIRN-201ENST00000601203 4374 ntBASIC19.6■□□□□ 0.73
SEMA4DQ92854 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA4DQ92854 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.59■□□□□ 0.73
SEMA4DQ92854 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
SEMA4DQ92854 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SEMA4DQ92854 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms