Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX1Q92499 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX1Q92499 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
DDX1Q92499 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX1Q92499 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX1Q92499 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX1Q92499 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX1Q92499 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 TSPY5P-201ENST00000426936 936 ntBASIC19.44■□□□□ 0.7
DDX1Q92499 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX1Q92499 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX1Q92499 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX1Q92499 GCSHP2-201ENST00000560971 527 ntBASIC19.44■□□□□ 0.7
DDX1Q92499 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX1Q92499 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DDX1Q92499 FLJ13224-201ENST00000313737 1514 ntBASIC19.44■□□□□ 0.7
DDX1Q92499 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX1Q92499 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX1Q92499 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
DDX1Q92499 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 AC067852.2-201ENST00000590513 2313 ntBASIC19.43■□□□□ 0.7
DDX1Q92499 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX1Q92499 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 HCG4P8-203ENST00000443049 980 ntBASIC19.43■□□□□ 0.7
DDX1Q92499 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX1Q92499 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX1Q92499 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX1Q92499 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
DDX1Q92499 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 AC093458.2-201ENST00000623150 629 ntBASIC19.43■□□□□ 0.7
DDX1Q92499 AL157888.1-201ENST00000631930 593 ntBASIC19.43■□□□□ 0.7
DDX1Q92499 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX1Q92499 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX1Q92499 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX1Q92499 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX1Q92499 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.42■□□□□ 0.7
DDX1Q92499 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 AP000997.3-201ENST00000623333 2250 ntBASIC19.42■□□□□ 0.7
DDX1Q92499 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDX1Q92499 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
DDX1Q92499 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms