Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.71■□□□□ 0.59
SCG3Q8WXD2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SCG3Q8WXD2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
SCG3Q8WXD2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AP000523.1-201ENST00000398242 1049 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AP003041.3-201ENST00000527151 707 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AC067852.2-201ENST00000590513 2313 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.7■□□□□ 0.58
SCG3Q8WXD2 AC073592.3-201ENST00000625118 1834 ntBASIC18.7■□□□□ 0.58
SCG3Q8WXD2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 FAM8A6P-201ENST00000407496 1135 ntBASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 KRT18P41-201ENST00000518924 1277 ntBASIC18.69■□□□□ 0.58
SCG3Q8WXD2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AL109659.2-201ENST00000606809 1674 ntBASIC18.69■□□□□ 0.58
SCG3Q8WXD2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC099398.1-201ENST00000567919 2776 ntBASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCG3Q8WXD2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms