Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC008040.2-201ENST00000461049 708 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 AC116562.2-201ENST00000507042 360 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 KRT8P45-201ENST00000414328 1447 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 REXO1L9P-201ENST00000604264 2108 ntBASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4IP1Q8WWV3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AL355355.2-201ENST00000442321 338 ntBASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 DGCR10-201ENST00000609839 495 ntBASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4IP1Q8WWV3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AL357033.4-201ENST00000617703 1807 ntBASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 CKBP1-201ENST00000565489 1086 ntBASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 AC026471.5-201ENST00000615068 467 ntBASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms