Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 LAGE3P1-201ENST00000425356 484 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 AC007967.2-201ENST00000432613 625 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 KRT18P65-201ENST00000439811 1286 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 AP006288.1-201ENST00000446065 395 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 DNAJB3-201ENST00000446806 729 ntBASIC22.12■■□□□ 1.13
SNED1Q8TER0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.12■■□□□ 1.13
SNED1Q8TER0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNED1Q8TER0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 AC073592.4-201ENST00000623827 446 ntBASIC22.11■■□□□ 1.13
SNED1Q8TER0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 AL161938.1-201ENST00000569833 2180 ntBASIC22.11■■□□□ 1.13
SNED1Q8TER0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.11■■□□□ 1.13
SNED1Q8TER0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SNED1Q8TER0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 AC005332.7-201ENST00000614046 2005 ntBASIC22.1■■□□□ 1.13
SNED1Q8TER0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 DNAJB3-202ENST00000449667 1266 ntBASIC22.1■■□□□ 1.13
SNED1Q8TER0 AL049812.1-201ENST00000432563 2267 ntBASIC22.1■■□□□ 1.13
SNED1Q8TER0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNED1Q8TER0 LINC00602-201ENST00000629776 2065 ntBASIC22.1■■□□□ 1.13
SNED1Q8TER0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.1■■□□□ 1.13
SNED1Q8TER0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 AC116562.4-201ENST00000641316 2276 ntBASIC22.09■■□□□ 1.13
SNED1Q8TER0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 AC073621.1-201ENST00000392730 636 ntBASIC22.09■■□□□ 1.13
SNED1Q8TER0 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SNED1Q8TER0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNED1Q8TER0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 MYLKP1-201ENST00000509077 1580 ntBASIC22.08■■□□□ 1.13
SNED1Q8TER0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SNED1Q8TER0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNED1Q8TER0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
SNED1Q8TER0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SNED1Q8TER0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms