Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD5Q8TDI0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHD5Q8TDI0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.39■□□□□ 0.54
CHD5Q8TDI0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 ABALON-201ENST00000629058 1903 ntBASIC18.39■□□□□ 0.53
CHD5Q8TDI0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 RN7SL606P-201ENST00000472779 293 ntBASIC18.39■□□□□ 0.53
CHD5Q8TDI0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 AC090616.6-201ENST00000582640 721 ntBASIC18.39■□□□□ 0.53
CHD5Q8TDI0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 AC005332.3-201ENST00000589904 676 ntBASIC18.39■□□□□ 0.53
CHD5Q8TDI0 AC011498.5-201ENST00000592027 486 ntBASIC18.39■□□□□ 0.53
CHD5Q8TDI0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD5Q8TDI0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AC138028.4-201ENST00000564984 1845 ntBASIC18.38■□□□□ 0.53
CHD5Q8TDI0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AC096633.1-201ENST00000422446 749 ntBASIC18.38■□□□□ 0.53
CHD5Q8TDI0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD5Q8TDI0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 AP002414.4-201ENST00000589764 1148 ntBASIC18.37■□□□□ 0.53
CHD5Q8TDI0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD5Q8TDI0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms