Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.56■□□□□ 0.72
LMO3Q8TAP4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 AC113404.2-201ENST00000507884 177 ntBASIC19.55■□□□□ 0.72
LMO3Q8TAP4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LMO3Q8TAP4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 KRT89P-201ENST00000620027 1478 ntBASIC19.54■□□□□ 0.72
LMO3Q8TAP4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LMO3Q8TAP4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 KRT18P55-202ENST00000578578 1546 ntBASIC19.53■□□□□ 0.72
LMO3Q8TAP4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AK4P3-201ENST00000418260 669 ntBASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 AC024563.2-201ENST00000603282 481 ntBASIC19.53■□□□□ 0.72
LMO3Q8TAP4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.53■□□□□ 0.72
LMO3Q8TAP4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 AC134043.2-201ENST00000624206 2238 ntBASIC19.52■□□□□ 0.72
LMO3Q8TAP4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LMO3Q8TAP4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms