Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 AC005332.7-201ENST00000614046 2005 ntBASIC14.17□□□□□ -0.14
LINC01006Q8NI28 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01006Q8NI28 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AP005117.1-201ENST00000584346 1413 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AL499627.1-201ENST00000569373 2188 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 LINC01126-201ENST00000623515 1646 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 HNRNPDP1-201ENST00000439535 754 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 KRT18P65-201ENST00000439811 1286 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AC116407.3-201ENST00000623905 1129 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 ZNF259P1-201ENST00000407656 1365 ntBASIC14.16□□□□□ -0.14
LINC01006Q8NI28 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01006Q8NI28 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ABCD1P5-201ENST00000445663 754 ntBASIC14.15□□□□□ -0.14
LINC01006Q8NI28 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 POLD2P1-201ENST00000511220 997 ntBASIC14.15□□□□□ -0.14
LINC01006Q8NI28 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 TERC-201ENST00000602385 541 ntBASIC14.15□□□□□ -0.14
LINC01006Q8NI28 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01006Q8NI28 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
LINC01006Q8NI28 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
LINC01006Q8NI28 PMS2P7-201ENST00000506558 1336 ntBASIC14.15□□□□□ -0.15
LINC01006Q8NI28 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LINC01006Q8NI28 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms