Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NEDD1Q8NHV4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
NEDD1Q8NHV4 AC004408.2-201ENST00000623613 2777 ntBASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NEDD1Q8NHV4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 KRT18P31-201ENST00000506277 1292 ntBASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 BNIP3P18-201ENST00000593976 575 ntBASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NEDD1Q8NHV4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 AC091304.2-201ENST00000564639 760 ntBASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 AC138894.3-201ENST00000603787 634 ntBASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NEDD1Q8NHV4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 MINOS1P3-201ENST00000457048 203 ntBASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 AC111152.3-201ENST00000569699 673 ntBASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 IFNL4P1-201ENST00000607083 540 ntBASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 AC093677.2-201ENST00000600169 1863 ntBASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NEDD1Q8NHV4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms