Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC148Q8NFR7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC148Q8NFR7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC148Q8NFR7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 AC024563.2-201ENST00000603282 481 ntBASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 AC083849.1-201ENST00000615227 514 ntBASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 KRT89P-201ENST00000620027 1478 ntBASIC21.01■□□□□ 0.95
CCDC148Q8NFR7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 LINC01126-201ENST00000623515 1646 ntBASIC21■□□□□ 0.95
CCDC148Q8NFR7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21■□□□□ 0.95
CCDC148Q8NFR7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 NTF6B-201ENST00000591913 560 ntBASIC21■□□□□ 0.95
CCDC148Q8NFR7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CCDC148Q8NFR7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC148Q8NFR7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC148Q8NFR7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms