Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 RPPH1-201ENST00000516869 333 ntBASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.09■□□□□ 0.17
DNAAF1Q8NEP3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
DNAAF1Q8NEP3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 CKBP1-201ENST00000565489 1086 ntBASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 AF186192.3-201ENST00000583427 947 ntBASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 AC011298.2-201ENST00000617989 482 ntBASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DNAAF1Q8NEP3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 AC130371.2-201ENST00000619443 611 ntBASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CR392000.1-201ENST00000624770 1228 ntBASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 RCC2P3-201ENST00000418112 1537 ntBASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms