Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 INGX-201ENST00000359239 846 ntBASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AL596275.1-201ENST00000423464 877 ntBASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AC093827.2-201ENST00000512654 315 ntBASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 AC010947.1-201ENST00000623454 693 ntBASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF439Q8NDP4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 ABALON-201ENST00000629058 1903 ntBASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 MMP23A-201ENST00000234610 1017 ntBASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 KRT8P7-201ENST00000533003 1432 ntBASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
ZNF439Q8NDP4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 AC066615.1-201ENST00000640911 628 ntBASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF439Q8NDP4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms