Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NME8Q8N427 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NME8Q8N427 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.08■□□□□ 0.8
NME8Q8N427 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NME8Q8N427 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.07■□□□□ 0.8
NME8Q8N427 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 TSPY12P-201ENST00000421279 868 ntBASIC20.07■□□□□ 0.8
NME8Q8N427 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.07■□□□□ 0.8
NME8Q8N427 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.07■□□□□ 0.8
NME8Q8N427 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.07■□□□□ 0.8
NME8Q8N427 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NME8Q8N427 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
NME8Q8N427 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NME8Q8N427 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.06■□□□□ 0.8
NME8Q8N427 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
NME8Q8N427 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
NME8Q8N427 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.06■□□□□ 0.8
NME8Q8N427 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 AC091607.1-201ENST00000490318 1060 ntBASIC20.06■□□□□ 0.8
NME8Q8N427 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NME8Q8N427 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.06■□□□□ 0.8
NME8Q8N427 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.06■□□□□ 0.8
NME8Q8N427 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NME8Q8N427 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 AL024508.2-201ENST00000607749 1894 ntBASIC20.06■□□□□ 0.8
NME8Q8N427 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NME8Q8N427 AL031008.1-201ENST00000619963 541 ntBASIC20.06■□□□□ 0.8
NME8Q8N427 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.06■□□□□ 0.8
NME8Q8N427 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NME8Q8N427 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.05■□□□□ 0.8
NME8Q8N427 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.05■□□□□ 0.8
NME8Q8N427 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.05■□□□□ 0.8
NME8Q8N427 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NME8Q8N427 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
NME8Q8N427 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.05■□□□□ 0.8
NME8Q8N427 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NME8Q8N427 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
NME8Q8N427 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NME8Q8N427 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.04■□□□□ 0.8
NME8Q8N427 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NME8Q8N427 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.04■□□□□ 0.8
NME8Q8N427 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NME8Q8N427 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.04■□□□□ 0.8
NME8Q8N427 AC068472.1-201ENST00000474589 881 ntBASIC20.04■□□□□ 0.8
NME8Q8N427 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.04■□□□□ 0.8
NME8Q8N427 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.04■□□□□ 0.8
NME8Q8N427 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.04■□□□□ 0.8
NME8Q8N427 AL121912.1-201ENST00000603683 238 ntBASIC20.04■□□□□ 0.8
NME8Q8N427 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.04■□□□□ 0.8
NME8Q8N427 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NME8Q8N427 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms