Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 AL353708.3-201ENST00000610272 989 ntBASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DEPDC4Q8N2C3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17■□□□□ 0.31
DEPDC4Q8N2C3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 AC026471.5-201ENST00000615068 467 ntBASIC17■□□□□ 0.31
DEPDC4Q8N2C3 REXO1L12P-201ENST00000622156 912 ntBASIC17■□□□□ 0.31
DEPDC4Q8N2C3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DEPDC4Q8N2C3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 KSR1P1-201ENST00000446298 240 ntBASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DEPDC4Q8N2C3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms