Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.12■□□□□ 0.33
CCDC71Q8IV32 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AC092338.2-201ENST00000568827 1415 ntBASIC17.12■□□□□ 0.33
CCDC71Q8IV32 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 PRORSD1P-202ENST00000563365 2154 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 TSPY5P-201ENST00000426936 936 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 UPK3BP1-201ENST00000428678 509 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 TSPY21P-201ENST00000433481 731 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AC092647.4-201ENST00000457211 535 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 COX11P1-201ENST00000489116 835 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AC010653.2-201ENST00000623505 997 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AC093677.2-201ENST00000600169 1863 ntBASIC17.11■□□□□ 0.33
CCDC71Q8IV32 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71Q8IV32 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 AL023803.3-201ENST00000615559 522 ntBASIC17.1■□□□□ 0.33
CCDC71Q8IV32 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 AC141257.4-201ENST00000634557 245 ntBASIC17.1■□□□□ 0.33
CCDC71Q8IV32 AC136944.6-201ENST00000634818 245 ntBASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71Q8IV32 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 FAM8A6P-201ENST00000407496 1135 ntBASIC17.09■□□□□ 0.33
CCDC71Q8IV32 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.09■□□□□ 0.33
CCDC71Q8IV32 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 TSPY17P-201ENST00000450329 467 ntBASIC17.09■□□□□ 0.33
CCDC71Q8IV32 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 AC011558.1-201ENST00000623459 338 ntBASIC17.09■□□□□ 0.33
CCDC71Q8IV32 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC71Q8IV32 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms