Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 AC141586.3-201ENST00000562166 1838 ntBASIC19.32■□□□□ 0.68
RNF135Q8IUD6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 AC027796.2-201ENST00000575326 344 ntBASIC19.32■□□□□ 0.68
RNF135Q8IUD6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 AL592071.1-201ENST00000611956 408 ntBASIC19.32■□□□□ 0.68
RNF135Q8IUD6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.32■□□□□ 0.68
RNF135Q8IUD6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 AL049812.1-201ENST00000432563 2267 ntBASIC19.32■□□□□ 0.68
RNF135Q8IUD6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF135Q8IUD6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 IRX1P1-201ENST00000438849 1838 ntBASIC19.31■□□□□ 0.68
RNF135Q8IUD6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 VENTXP7-201ENST00000475503 772 ntBASIC19.31■□□□□ 0.68
RNF135Q8IUD6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 AC140113.2-201ENST00000604370 208 ntBASIC19.31■□□□□ 0.68
RNF135Q8IUD6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF135Q8IUD6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 GUSBP12-201ENST00000513727 720 ntBASIC19.3■□□□□ 0.68
RNF135Q8IUD6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 AC139887.3-201ENST00000568585 713 ntBASIC19.3■□□□□ 0.68
RNF135Q8IUD6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 GPR32P1-201ENST00000601788 811 ntBASIC19.3■□□□□ 0.68
RNF135Q8IUD6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 TNXA-203ENST00000507684 2038 ntBASIC19.3■□□□□ 0.68
RNF135Q8IUD6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF135Q8IUD6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms