Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM50Q86XT4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 MINOS1P3-201ENST00000457048 203 ntBASIC20.31■□□□□ 0.84
TRIM50Q86XT4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 BNIP3P18-201ENST00000593976 575 ntBASIC20.31■□□□□ 0.84
TRIM50Q86XT4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM50Q86XT4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 LINC01711-201ENST00000598340 967 ntBASIC20.3■□□□□ 0.84
TRIM50Q86XT4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM50Q86XT4 LINC00602-201ENST00000629776 2065 ntBASIC20.3■□□□□ 0.84
TRIM50Q86XT4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 TSPY12P-201ENST00000421279 868 ntBASIC20.29■□□□□ 0.84
TRIM50Q86XT4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms