Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAPH1Q70E73 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAPH1Q70E73 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAPH1Q70E73 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAPH1Q70E73 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.37■□□□□ 0.53
RAPH1Q70E73 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 AP000593.1-201ENST00000393668 712 ntBASIC18.36■□□□□ 0.53
RAPH1Q70E73 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TSPY20P-201ENST00000450910 630 ntBASIC18.36■□□□□ 0.53
RAPH1Q70E73 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 DGCR10-201ENST00000609839 495 ntBASIC18.36■□□□□ 0.53
RAPH1Q70E73 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.36■□□□□ 0.53
RAPH1Q70E73 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAPH1Q70E73 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 AC138028.4-201ENST00000564984 1845 ntBASIC18.35■□□□□ 0.53
RAPH1Q70E73 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 AC034236.2-201ENST00000606662 1610 ntBASIC18.35■□□□□ 0.53
RAPH1Q70E73 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 AC097488.1-201ENST00000507834 756 ntBASIC18.35■□□□□ 0.53
RAPH1Q70E73 NUDT16P1-203ENST00000513809 620 ntBASIC18.35■□□□□ 0.53
RAPH1Q70E73 AC142381.4-202ENST00000563973 229 ntBASIC18.35■□□□□ 0.53
RAPH1Q70E73 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAPH1Q70E73 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAPH1Q70E73 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 AC099343.3-201ENST00000605834 2503 ntBASIC18.34■□□□□ 0.53
RAPH1Q70E73 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAPH1Q70E73 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAPH1Q70E73 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RAPH1Q70E73 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RAPH1Q70E73 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RAPH1Q70E73 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.33■□□□□ 0.53
RAPH1Q70E73 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAPH1Q70E73 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAPH1Q70E73 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms