Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR3Q6ZTQ4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR3Q6ZTQ4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR3Q6ZTQ4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 PHGDH-209ENST00000641074 1780 ntBASIC18.33■□□□□ 0.53
CDHR3Q6ZTQ4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 SLC25A3P1-201ENST00000443844 931 ntBASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 ECEL1P2-202ENST00000465689 757 ntBASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 PP12613-201ENST00000424958 2230 ntBASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR3Q6ZTQ4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AC012317.2-201ENST00000623305 2251 ntBASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AC005521.1-201ENST00000393351 872 ntBASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AC113347.1-201ENST00000413321 391 ntBASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR3Q6ZTQ4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 AC080080.1-201ENST00000625121 2420 ntBASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 AC128688.1-201ENST00000487626 519 ntBASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 RN7SL850P-201ENST00000579959 291 ntBASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 FAM87A-204ENST00000613235 858 ntBASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDHR3Q6ZTQ4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR3Q6ZTQ4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms