Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXR1Q6PIV2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXR1Q6PIV2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 NAPSB-206ENST00000562112 1266 ntBASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXR1Q6PIV2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 KRT16P6-202ENST00000425692 1426 ntBASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXR1Q6PIV2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXR1Q6PIV2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXR1Q6PIV2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXR1Q6PIV2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXR1Q6PIV2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXR1Q6PIV2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms