Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DENND1BQ6P3S1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 HBZP1-201ENST00000354915 429 ntBASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
DENND1BQ6P3S1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 VENTXP5-201ENST00000523979 775 ntBASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND1BQ6P3S1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 LINC01311-201ENST00000565162 1445 ntBASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 AL049597.2-201ENST00000565575 961 ntBASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND1BQ6P3S1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms