Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SWSAP1Q6NVH7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
SWSAP1Q6NVH7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 IGHV3-47-201ENST00000425060 335 ntBASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 AC068472.1-201ENST00000474589 881 ntBASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.27■□□□□ 0.84
SWSAP1Q6NVH7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SWSAP1Q6NVH7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SWSAP1Q6NVH7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SWSAP1Q6NVH7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 UNC93B7-201ENST00000509439 705 ntBASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SWSAP1Q6NVH7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 TSPY19P-201ENST00000418461 509 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 TSPY18P-201ENST00000441642 509 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 VENTXP7-201ENST00000475503 772 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 AC099336.1-202ENST00000602961 463 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 AL732292.2-201ENST00000609649 430 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 AL353801.3-201ENST00000609898 542 ntBASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SWSAP1Q6NVH7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms