Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 KRT18P35-201ENST00000510488 1269 ntBASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 AL121956.5-201ENST00000625261 221 ntBASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 AC093677.2-201ENST00000600169 1863 ntBASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 VENTXP5-201ENST00000523979 775 ntBASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 AL445228.2-201ENST00000605589 952 ntBASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP4R3AQ6IN85 LETM1P2-201ENST00000597330 2178 ntBASIC20.7■□□□□ 0.91
PPP4R3AQ6IN85 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AC026471.1-201ENST00000564629 3026 ntBASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 BICD1-207ENST00000551848 1962 ntBASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AC113404.2-201ENST00000507884 177 ntBASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP4R3AQ6IN85 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 FAM86EP-206ENST00000510506 987 ntBASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 AC087388.1-201ENST00000571370 1112 ntBASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 AC135776.1-201ENST00000319817 2481 ntBASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP4R3AQ6IN85 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms