Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 FLJ38576-201ENST00000623820 2459 ntBASIC17.61■□□□□ 0.41
RNF220Q5VTB9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF220Q5VTB9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AC103702.1-201ENST00000548801 2630 ntBASIC17.6■□□□□ 0.41
RNF220Q5VTB9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AC124016.1-201ENST00000609552 612 ntBASIC17.6■□□□□ 0.41
RNF220Q5VTB9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF220Q5VTB9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF220Q5VTB9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms