Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 PRYP5-201ENST00000451909 266 ntBASIC15.75■□□□□ 0.11
LRRK2Q5S007 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRK2Q5S007 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRK2Q5S007 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 TFAMP1-201ENST00000412727 736 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 LINC00628-201ENST00000628516 1289 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 AC236430.1-201ENST00000402231 743 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 AL390955.2-201ENST00000603032 514 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 AL022326.1-202ENST00000641533 845 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRK2Q5S007 TEX21P-204ENST00000641479 1693 ntBASIC15.74■□□□□ 0.11
LRRK2Q5S007 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRK2Q5S007 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 ARSEP1-201ENST00000420443 635 ntBASIC15.73■□□□□ 0.11
LRRK2Q5S007 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 KRT19P2-202ENST00000557173 1012 ntBASIC15.73■□□□□ 0.11
LRRK2Q5S007 AC105339.1-204ENST00000636249 355 ntBASIC15.73■□□□□ 0.11
LRRK2Q5S007 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRK2Q5S007 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRK2Q5S007 AC079776.2-201ENST00000641154 1609 ntBASIC15.72■□□□□ 0.11
LRRK2Q5S007 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 AC245100.3-201ENST00000441281 285 ntBASIC15.72■□□□□ 0.11
LRRK2Q5S007 FAM207CP-201ENST00000443486 507 ntBASIC15.72■□□□□ 0.11
LRRK2Q5S007 BX005266.1-201ENST00000473402 457 ntBASIC15.72■□□□□ 0.11
LRRK2Q5S007 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
LRRK2Q5S007 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRK2Q5S007 AC004461.1-201ENST00000412461 403 ntBASIC15.72■□□□□ 0.11
LRRK2Q5S007 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms