Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ARMC10P1-201ENST00000313754 855 ntBASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 AP003733.1-201ENST00000491725 852 ntBASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 AL445228.2-201ENST00000605589 952 ntBASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01556Q5JQF7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01556Q5JQF7 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms